Mindblown: a blog about philosophy.

The positively and negatively charged side chains of proteins cause them to behave like amino acids in an electrical field; that is, they migrate during electrophoresis at low pH values to the cathode (negative terminal) and at high pH values to the anode (positive terminal). The isoelectric point, the pH value at which the protein molecule does not migrate,…

When measured volumes of hydrochloric acid are added to a solution of protein in salt-free water, the pH decreases in proportion to the amount of hydrogen ions added until it is about 4. Further addition of acid causes much less decrease in pH because the protein acts as a buffer at pH values of 3 to 4. The reaction that takes…

Because the α-amino group and α-carboxyl group of amino acids are converted into peptide bonds in the protein molecule, there is only one α-amino group (at the N terminus) and one α-carboxyl group (at the C terminus) in a given protein molecule. The electrochemical character of a protein is affected very little by these two groups. Of…

When dry proteins are exposed to air of high water content, they rapidly bind water up to a maximum quantity, which differs for different proteins; usually it is 10 to 20 percent of the weight of the protein. The hydrophilic groups of a protein are chiefly the positively charged groups in the side chains of lysine and arginine and…

In the technique of X-ray diffraction, the X-rays are allowed to strike a protein crystal. The X-rays, diffracted (bent) by the crystal, impinge on a photographic plate, forming a pattern of spots. This method reveals that peptide chains can assume very complicated, apparently irregular shapes. Two extremes in shape include the closely folded structure of the globular proteins and the elongated,…

The molecular weight of proteins The molecular weight of proteins cannot be determined by the methods of classical chemistry (e.g., freezing-point depression), because they require solutions of a higher concentration of protein than can be prepared. If a protein contains only one molecule of one of the amino acids or one atom of iron, copper, or another element, the minimum molecular weight of…

Animal material usually contains large amounts of protein and lipids and small amounts of carbohydrate; in plants, the bulk of the dry matter is usually carbohydrate. If it is necessary to determine the amount of protein in a mixture of animal foodstuffs, a sample is converted to ammonium salts by boiling with sulfuric acid and a suitable inorganic catalyst,…

The nature of the quaternary structure is demonstrated by the structure of hemoglobin. Each molecule of human hemoglobin consists of four peptide chains, two α-chains and two β-chains; i.e., it is a tetramer. The four subunits are linked to each other by hydrogen bonds and hydrophobic interaction. Because the four subunits are so closely linked, the hemoglobin tetramer is called…

The tertiary structure is the product of the interaction between the side chains (R) of the amino acids composing the protein. Some of them contain positively or negatively charged groups, others are polar, and still others are nonpolar. The number of carbon atoms in the side chain varies from zero in glycine to nine in tryptophan. Positively…

The nitrogen and carbon atoms of a peptide chain cannot lie on a straight line, because of the magnitude of the bond angles between adjacent atoms of the chain; the bond angle is about 110°. Each of the nitrogen and carbon atoms can rotate to a certain extent, however, so that the chain has a limited flexibility. Because all of the amino acids,…